Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809410.1_cds_XP_016495729.1_10019
CDS Infomation

[gene=LOC107814781] [db_xref=GeneID:107814781] [protein=E3 ubiquitin-protein ligase KEG-like] [protein_id=XP_016495729.1] [location=join(1464..1943,2019..2110,2203..2676,5735..6701)] [gbkey=CDS]
Sequence

ATGATCTCTAACTTAATATATATGGAGCTTCAGTTTACTCCTGTGGTGGTTTCCTATGTG
CCTTCTTTTCATGAATTCCTATCTTCAGAAAATAAGACTTCTTATTACAGGAGAATGGCT
GGGAAAGCTGTGGTTAAGCAGCCAATATCTGCATTCGACTTTGAGATTGTTGAAGGTGTT
TCCGATAACCTTACAACTGTTGTGGCATCTTCTAGCCAGAGTAGCCCATGGATTGACCCT
GCAACTATTAAACTTAGACATAGAATTGGAAGGGGTCTATTTGGGGATGTTTGGTTAGCA
ACTCGTCACCAAACCACTGCAGATTATGACGAGTATCATGAAGTAGCTGTGAAGATGTTG
CATCCTATGAAGGAGGAGAACATCAATGTTGTCTTAGATCGGCTGGGAAATTTGTTTACT
CAGTGTCAAGAACTAAAACATATTTGCTGGCTTCAGGGGCTGTCTGTGATAAATGGAAAG
CTATGCATTGTTATGAAGTTCTATGAAGGTTCTGTTGGTGATAAAATGGCTCGTGCAAAA
GAAGGAAAGCTGTCCTTGCGAGATGTTATAAGGTATGGGACTGATCTTGCTCGTGGGATA
ATGGAGCTACACTCGAAGGAGATCTTGATTCTTAACCTTAAACCTTATAATTTCCTTTTG
AATGAAAATGATCATGCAATTTTGGGGGATATTGGGATTCCTTATCTGCTTCTTGGAGTT
CCTTTGTTGAGTTCAGATATGTCAACAAGACTTGGCACCCCAAATTACATGGCTCCAGAA
CAATGGCAGCCAGAAGTTAGGGGTCCCATATCTTTTGAGACAGATTCATGGGGATTCGGT
TGCAGCATTGTGGAGATGCTGACTGGTTCTCAGCCATGGAGTGGTAAATCAGTTGATGAA
ATATTTAAATCTATTGTAAAGAGACAAGAGAAACCACATATTCCTGGAGGCCTCCCTCCT
GCGGTTGAAAGTGTCATAGTTGGTTGTTTTGAGTATGATTTCAGGAATCGCCCTCTGATG
GGAGACATATTGCATGCATTTCTAAGTTCACAGGAAGCAGCTTATGGCGATGAGGGATGG
AGAGACCCGGGGAGTCGGGTTAACTTGGACAAATTAAGTGGAAGTGGCTATAGCAAGTGG
TTGGTCCTAAAGGATCAGCTTCAAATTGGAGACACTGTGAGATCCAGGAAGCCACCAAAC
TCATGTAAACCTGAAAACATGGAGGTACCAGGCGGTACCATTGTTGGCATGGAACGAGAT
ACGGAACGAAATGGATTTGTGCTGGTGAGGGTGCATGGAATCCATGATCCTCTTAGAGTT
CATGGATCGACATTGGAGCGGGTGACATTTGGCTTGGCTGCAGGAGATTGGGTACGTTTG
AAGGCGAACGGTAAGAAACATTCATCGGTAGGCATCCTTCACTCCATTGATCGTGATGGA
AGTGTAGCTGTTGCATTCATAGGTTTGGAGACCTTTTGGAAGGGTAACTGCTCCGAGCTT
CAGATGGCAGAAGCTTACTGTGCTGGACAGTTTGTAAGGCTGAAGCCTGATATCTTCAGT
CCGCGCTTTGAATGGCCCCGAAAGAGAGGTGGTGACTGGGCAACAGGTAGAATTTGTCAG
GTGCTACCTAATGGGTGTCTTCTTGTGAACTTTCCTGGTATGCTGGTGTTTGGTGATGAA
AATAGCAGCTTTTTGGCTGATCCAGCGGAAGTTGAAATCGTTTCTTTTAACGCTTGCCCT
GGTATTGTGAAGAAGTATCAACACCTTGAGGACTTCCACTGGGCTGTTAGACCACTGTTG
ATTGCGTTAGGCCTATTTACTGCTATGAAGCTTGGCCTTTTTGTTGGCAAGAAAGTCAGG
AGATCAAAGGTGAAGACGGGACGCAACCCGGTGATACCCTTTGAAGGTCAACAAGGGGAT
GCTCAAAATGCTAGCAATGCAGCATGGCTTCCGCCAAAGGTGGCAAATATCATATTCAGA
GAAGGGGCTAGTGTAACAACCACCTCTAGGTAG

Peptide Sequence

PEP ID

XP_016495729.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana tabacum]
Sequence

MISNLIYMELQFTPVVVSYVPSFHEFLSSENKTSYYRRMAGKAVVKQPISAFDFEIVEGV
SDNLTTVVASSSQSSPWIDPATIKLRHRIGRGLFGDVWLATRHQTTADYDEYHEVAVKML
HPMKEENINVVLDRLGNLFTQCQELKHICWLQGLSVINGKLCIVMKFYEGSVGDKMARAK
EGKLSLRDVIRYGTDLARGIMELHSKEILILNLKPYNFLLNENDHAILGDIGIPYLLLGV
PLLSSDMSTRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCSIVEMLTGSQPWSGKSVDE
IFKSIVKRQEKPHIPGGLPPAVESVIVGCFEYDFRNRPLMGDILHAFLSSQEAAYGDEGW
RDPGSRVNLDKLSGSGYSKWLVLKDQLQIGDTVRSRKPPNSCKPENMEVPGGTIVGMERD
TERNGFVLVRVHGIHDPLRVHGSTLERVTFGLAAGDWVRLKANGKKHSSVGILHSIDRDG
SVAVAFIGLETFWKGNCSELQMAEAYCAGQFVRLKPDIFSPRFEWPRKRGGDWATGRICQ
VLPNGCLLVNFPGMLVFGDENSSFLADPAEVEIVSFNACPGIVKKYQHLEDFHWAVRPLL
IALGLFTAMKLGLFVGKKVRRSKVKTGRNPVIPFEGQQGDAQNASNAAWLPPKVANIIFR
EGASVTTTSR

Transcript Sequence

Gene sequence data has not been registered.